Sohini Chakraborty

Sohini Chakraborty
Computational Identification of Traditional Medicinal Phytocompounds Targeting AKR1C3 in Breast Cancer

Sohini Chakraborty

University / Institution

REVA University

Representing

India

Abstract 

Breast cancer is one of the most prevalent malignancies among women worldwide, with estrogen biosynthesis playing a pivotal role in tumor growth and progression. Although endocrine therapies have improved clinical outcomes, adverse effects and drug resistance remain major challenges, highlighting the need for novel therapeutic alternatives. Traditional medicinal plants represent a valuable source of bioactive compounds with potential anticancer properties. This study employed an integrated in-silico approach combining network pharmacology, molecular docking, and molecular dynamics simulations to identify key molecular targets involved in estrogen biosynthesis and evaluate phytocompounds as potential inhibitors. Network analysis of estrogen biosynthesis-associated genes revealed six hub mRNAs (AKR1C3, STS, CYP11A1, ESR1, ESR2, and AR) within a regulatory network comprising mRNAs, miRNAs, lncRNAs, and small molecules. Expression and survival analyses further supported their relevance in breast cancer pathogenesis. Selected phytocompounds were screened for drug-likeness and toxicity and subsequently subjected to molecular docking studies. Among the compounds evaluated, Resibufogenin and Bassianin exhibited stronger binding affinities toward AKR1C3 than the reference drug Tamoxifen. The stability of the protein–ligand complexes was further assessed through molecular dynamics simulations using RMSD, RMSF, SASA, radius of gyration, principal component analysis, and free energy landscape analyses. Both phytocompounds demonstrated stable interactions and favorable binding characteristics throughout the simulation period. These findings highlight the therapeutic potential of traditional medicinal phytocompounds targeting estrogen biosynthesis in breast cancer and identify Resibufogenin and Bassianin as promising candidates for further experimental validation.